Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Gm10653-202ENSMUST00000139570 835 ntBASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Gm4968-201ENSMUST00000071458 858 ntBASIC18.92■□□□□ 0.62
Shroom3Q9QXN0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shroom3Q9QXN0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Gm13146-201ENSMUST00000118508 780 ntBASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shroom3Q9QXN0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shroom3Q9QXN0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shroom3Q9QXN0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Shroom3Q9QXN0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.86■□□□□ 0.61
Shroom3Q9QXN0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms