Protein–RNA interactions for Protein: Q9QXK9

Sh2d2a, SH2 domain-containing protein 2A, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d2aQ9QXK9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Sh2d2aQ9QXK9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Gm11421-201ENSMUST00000122124 294 ntBASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Gm40848-201ENSMUST00000221998 324 ntBASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d2aQ9QXK9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d2aQ9QXK9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Sh2d2aQ9QXK9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh2d2aQ9QXK9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Sh2d2aQ9QXK9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Sh2d2aQ9QXK9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Sh2d2aQ9QXK9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms