Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.99■□□□□ 0.95
Chaf1aQ9QWF0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1aQ9QWF0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 BC021767-201ENSMUST00000126387 1716 ntBASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Chaf1aQ9QWF0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Chaf1aQ9QWF0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1aQ9QWF0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Chaf1aQ9QWF0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1aQ9QWF0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms