Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a3bpQ9EQG9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Gm10493-201ENSMUST00000097270 612 ntBASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col4a3bpQ9EQG9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col4a3bpQ9EQG9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col4a3bpQ9EQG9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Col4a3bpQ9EQG9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Gm7860-201ENSMUST00000121190 879 ntBASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col4a3bpQ9EQG9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.5■■□□□ 1.03
Col4a3bpQ9EQG9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Gm27801-201ENSMUST00000184174 223 ntBASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col4a3bpQ9EQG9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms