Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.2■□□□□ 0.5
Sh2d4aQ9D7V1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Rps24-207ENSMUST00000224568 714 ntBASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Golgb1-201ENSMUST00000023534 498 ntBASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh2d4aQ9D7V1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh2d4aQ9D7V1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh2d4aQ9D7V1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4aQ9D7V1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4aQ9D7V1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2d4aQ9D7V1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Gm12922-201ENSMUST00000120626 809 ntBASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4aQ9D7V1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.13■□□□□ 0.49
Sh2d4aQ9D7V1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Sh2d4aQ9D7V1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4aQ9D7V1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4aQ9D7V1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms