Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.1■□□□□ 0.33
Upk3bl1Q9D701 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.09■□□□□ 0.33
Upk3bl1Q9D701 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bl1Q9D701 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bl1Q9D701 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Gm12366-201ENSMUST00000121722 873 ntBASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Gm5786-201ENSMUST00000085368 882 ntBASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bl1Q9D701 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bl1Q9D701 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Gm45444-201ENSMUST00000211394 898 ntBASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bl1Q9D701 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bl1Q9D701 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms