Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Snrnp48Q9D361 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Gm42778-201ENSMUST00000199644 553 ntBASIC18.77■□□□□ 0.6
Snrnp48Q9D361 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Snrnp48Q9D361 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Snrnp48Q9D361 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Gm18284-201ENSMUST00000172604 624 ntBASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Snrnp48Q9D361 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Gm13534-201ENSMUST00000121169 513 ntBASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Snrnp48Q9D361 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Gm5874-201ENSMUST00000096101 508 ntBASIC18.74■□□□□ 0.59
Snrnp48Q9D361 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Snrnp48Q9D361 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp48Q9D361 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Gm10033-202ENSMUST00000211874 928 ntBASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp48Q9D361 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Golph3-205ENSMUST00000228671 2842 ntBASIC18.71■□□□□ 0.59
Snrnp48Q9D361 BC021767-201ENSMUST00000126387 1716 ntBASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp48Q9D361 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.7■□□□□ 0.58
Snrnp48Q9D361 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms