Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 AA386476-201ENSMUST00000098781 1665 ntBASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd1Q9D0E3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Gm24589-201ENSMUST00000116692 94 ntBASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Lysmd1Q9D0E3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd1Q9D0E3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.34■□□□□ 0.85
Lysmd1Q9D0E3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd1Q9D0E3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd1Q9D0E3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd1Q9D0E3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.33■□□□□ 0.85
Lysmd1Q9D0E3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd1Q9D0E3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd1Q9D0E3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lysmd1Q9D0E3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Gm27463-201ENSMUST00000183569 57 ntBASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Gm37292-201ENSMUST00000192062 758 ntBASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Lysmd1Q9D0E3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Lysmd1Q9D0E3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 Gm2274-201ENSMUST00000184539 609 ntBASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.3■□□□□ 0.84
Lysmd1Q9D0E3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Gm10138-203ENSMUST00000206952 366 ntBASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lysmd1Q9D0E3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Lysmd1Q9D0E3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lysmd1Q9D0E3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms