Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Rarb-207ENSMUST00000225921 2756 ntBASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Snf8Q9CZ28 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snf8Q9CZ28 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snf8Q9CZ28 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Snf8Q9CZ28 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snf8Q9CZ28 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Snf8Q9CZ28 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Snf8Q9CZ28 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Snf8Q9CZ28 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Snf8Q9CZ28 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.33■□□□□ 0.68
Snf8Q9CZ28 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Snf8Q9CZ28 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Snf8Q9CZ28 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Snf8Q9CZ28 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Spcs1-204ENSMUST00000226782 949 ntBASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Snf8Q9CZ28 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Gm9847-201ENSMUST00000052528 599 ntBASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Snf8Q9CZ28 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Snf8Q9CZ28 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms