Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Gm21956-201ENSMUST00000179946 522 ntBASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssr1Q9CY50 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ssr1Q9CY50 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssr1Q9CY50 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssr1Q9CY50 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ssr1Q9CY50 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ssr1Q9CY50 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Gm12251-201ENSMUST00000117893 792 ntBASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssr1Q9CY50 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssr1Q9CY50 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.24■□□□□ 0.83
Ssr1Q9CY50 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms