Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chd1lQ9CXF7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chd1lQ9CXF7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chd1lQ9CXF7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chd1lQ9CXF7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chd1lQ9CXF7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Chd1lQ9CXF7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1lQ9CXF7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd1lQ9CXF7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1lQ9CXF7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1lQ9CXF7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Chd1lQ9CXF7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1lQ9CXF7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1lQ9CXF7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Fst-202ENSMUST00000223640 2612 ntBASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Chd1lQ9CXF7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Chd1lQ9CXF7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1lQ9CXF7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms