Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx28Q9CWT6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx28Q9CWT6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx28Q9CWT6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ddx28Q9CWT6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Gm43137-201ENSMUST00000198052 594 ntBASIC17.52■□□□□ 0.4
Ddx28Q9CWT6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx28Q9CWT6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Spcs1-204ENSMUST00000226782 949 ntBASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx28Q9CWT6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx28Q9CWT6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx28Q9CWT6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx28Q9CWT6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms