Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.71■□□□□ 0.58
Lrrc40Q9CRC8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.7■□□□□ 0.58
Lrrc40Q9CRC8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lrrc40Q9CRC8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lrrc40Q9CRC8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrrc40Q9CRC8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrrc40Q9CRC8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.65■□□□□ 0.58
Lrrc40Q9CRC8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.64■□□□□ 0.57
Lrrc40Q9CRC8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc40Q9CRC8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrrc40Q9CRC8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms