Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap4Q99P47 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Gm5408-201ENSMUST00000197998 747 ntBASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap4Q99P47 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap4Q99P47 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap4Q99P47 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap4Q99P47 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap4Q99P47 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Cntnap4Q99P47 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap4Q99P47 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Gm26524-201ENSMUST00000192339 390 ntBASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap4Q99P47 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cntnap4Q99P47 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cntnap4Q99P47 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Gm12527-201ENSMUST00000117967 564 ntBASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cntnap4Q99P47 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cntnap4Q99P47 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cntnap4Q99P47 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cntnap4Q99P47 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms