Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tpgs1Q99MS8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tpgs1Q99MS8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tpgs1Q99MS8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tpgs1Q99MS8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tpgs1Q99MS8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tpgs1Q99MS8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tpgs1Q99MS8 Gm7290-201ENSMUST00000104990 617 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Gm12918-201ENSMUST00000120234 636 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Gm15710-201ENSMUST00000121821 636 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Gm5075-201ENSMUST00000196916 622 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Tpgs1Q99MS8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tpgs1Q99MS8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.62■□□□□ 0.73
Tpgs1Q99MS8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Gm12933-201ENSMUST00000120203 872 ntBASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tpgs1Q99MS8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tpgs1Q99MS8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tpgs1Q99MS8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms