Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-1Q99MA9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-1Q99MA9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-1Q99MA9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx6-1Q99MA9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx6-1Q99MA9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.64■□□□□ 0.41
Nkx6-1Q99MA9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-1Q99MA9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-1Q99MA9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-1Q99MA9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms