Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cstf1Q99LC2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cstf1Q99LC2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cstf1Q99LC2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.76■□□□□ 0.59
Cstf1Q99LC2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cstf1Q99LC2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cstf1Q99LC2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.74■□□□□ 0.59
Cstf1Q99LC2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.74■□□□□ 0.59
Cstf1Q99LC2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cstf1Q99LC2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cstf1Q99LC2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cstf1Q99LC2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cstf1Q99LC2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms