Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TrabdQ99JY4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TrabdQ99JY4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TrabdQ99JY4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TrabdQ99JY4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TrabdQ99JY4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TrabdQ99JY4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TrabdQ99JY4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TrabdQ99JY4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TrabdQ99JY4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Gm27011-201ENSMUST00000182352 972 ntBASIC19.56■□□□□ 0.72
TrabdQ99JY4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.56■□□□□ 0.72
TrabdQ99JY4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TrabdQ99JY4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.55■□□□□ 0.72
TrabdQ99JY4 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.55■□□□□ 0.72
TrabdQ99JY4 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.55■□□□□ 0.72
TrabdQ99JY4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TrabdQ99JY4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.54■□□□□ 0.72
TrabdQ99JY4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.54■□□□□ 0.72
TrabdQ99JY4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.54■□□□□ 0.72
TrabdQ99JY4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TrabdQ99JY4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Rab3c-203ENSMUST00000224180 967 ntBASIC19.53■□□□□ 0.72
TrabdQ99JY4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TrabdQ99JY4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TrabdQ99JY4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TrabdQ99JY4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TrabdQ99JY4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.52■□□□□ 0.72
TrabdQ99JY4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.52■□□□□ 0.72
TrabdQ99JY4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TrabdQ99JY4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TrabdQ99JY4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.52■□□□□ 0.72
TrabdQ99JY4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TrabdQ99JY4 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.52■□□□□ 0.72
TrabdQ99JY4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms