Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Golgb1-201ENSMUST00000023534 498 ntBASIC18.71■□□□□ 0.59
Homer3Q99JP6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Homer3Q99JP6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Homer3Q99JP6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Homer3Q99JP6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.69■□□□□ 0.58
Homer3Q99JP6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Homer3Q99JP6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Rarb-207ENSMUST00000225921 2756 ntBASIC18.68■□□□□ 0.58
Homer3Q99JP6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.68■□□□□ 0.58
Homer3Q99JP6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Homer3Q99JP6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.67■□□□□ 0.58
Homer3Q99JP6 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.67■□□□□ 0.58
Homer3Q99JP6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.67■□□□□ 0.58
Homer3Q99JP6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Homer3Q99JP6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Homer3Q99JP6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.65■□□□□ 0.58
Homer3Q99JP6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.65■□□□□ 0.58
Homer3Q99JP6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Gm12922-201ENSMUST00000120626 809 ntBASIC18.65■□□□□ 0.58
Homer3Q99JP6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
Homer3Q99JP6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Homer3Q99JP6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Homer3Q99JP6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Homer3Q99JP6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms