Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfc4Q99J62 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Gm44549-201ENSMUST00000208351 577 ntBASIC21.73■■□□□ 1.07
Rfc4Q99J62 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.73■■□□□ 1.07
Rfc4Q99J62 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfc4Q99J62 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Gm18666-201ENSMUST00000190039 958 ntBASIC21.72■■□□□ 1.07
Rfc4Q99J62 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.72■■□□□ 1.07
Rfc4Q99J62 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfc4Q99J62 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.71■■□□□ 1.07
Rfc4Q99J62 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rfc4Q99J62 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfc4Q99J62 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Rfc4Q99J62 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.7■■□□□ 1.06
Rfc4Q99J62 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Gm11249-201ENSMUST00000117071 859 ntBASIC21.7■■□□□ 1.06
Rfc4Q99J62 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.7■■□□□ 1.06
Rfc4Q99J62 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.7■■□□□ 1.06
Rfc4Q99J62 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.7■■□□□ 1.06
Rfc4Q99J62 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.7■■□□□ 1.06
Rfc4Q99J62 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rfc4Q99J62 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Gm715-201ENSMUST00000117865 831 ntBASIC21.69■■□□□ 1.06
Rfc4Q99J62 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfc4Q99J62 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rfc4Q99J62 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.68■■□□□ 1.06
Rfc4Q99J62 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.67■■□□□ 1.06
Rfc4Q99J62 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms