Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prdm9Q96EQ9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prdm9Q96EQ9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Prdm9Q96EQ9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prdm9Q96EQ9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Prdm9Q96EQ9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.52■□□□□ 0.56
Prdm9Q96EQ9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.52■□□□□ 0.56
Prdm9Q96EQ9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Prdm9Q96EQ9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prdm9Q96EQ9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Prdm9Q96EQ9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prdm9Q96EQ9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.51■□□□□ 0.55
Prdm9Q96EQ9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prdm9Q96EQ9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prdm9Q96EQ9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prdm9Q96EQ9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prdm9Q96EQ9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms