Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1aQ921W0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Grk6-206ENSMUST00000224995 2971 ntBASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1aQ921W0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chmp1aQ921W0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chmp1aQ921W0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.57■□□□□ 0.24
Chmp1aQ921W0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chmp1aQ921W0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Gm7417-201ENSMUST00000192950 473 ntBASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp1aQ921W0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms