Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha9Q91Y11 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 BC021767-201ENSMUST00000126387 1716 ntBASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdha9Q91Y11 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha9Q91Y11 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha9Q91Y11 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha9Q91Y11 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha9Q91Y11 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha9Q91Y11 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha9Q91Y11 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdha9Q91Y11 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha9Q91Y11 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gm19094-201ENSMUST00000209791 1246 ntBASIC20■□□□□ 0.79
Pcdha9Q91Y11 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha9Q91Y11 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Gm6420-201ENSMUST00000193885 723 ntBASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha9Q91Y11 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha9Q91Y11 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 Gm27405-201ENSMUST00000184201 112 ntBASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha9Q91Y11 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms