Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Gm43173-201ENSMUST00000202246 593 ntBASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhac1Q91Y10 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhac1Q91Y10 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhac1Q91Y10 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhac1Q91Y10 BC021767-201ENSMUST00000126387 1716 ntBASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhac1Q91Y10 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhac1Q91Y10 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.52■□□□□ 0.39
Pcdhac1Q91Y10 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhac1Q91Y10 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhac1Q91Y10 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhac1Q91Y10 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhac1Q91Y10 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms