Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb1Q91Y08 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb1Q91Y08 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.58■□□□□ 0.73
Pcdhb1Q91Y08 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb1Q91Y08 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb1Q91Y08 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb1Q91Y08 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
Pcdhb1Q91Y08 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb1Q91Y08 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb1Q91Y08 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhb1Q91Y08 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb1Q91Y08 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb1Q91Y08 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb1Q91Y08 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb1Q91Y08 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Reep4-203ENSMUST00000226563 1444 ntBASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb1Q91Y08 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Gm13146-201ENSMUST00000118508 780 ntBASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb1Q91Y08 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms