Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgc3Q91XX1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Gm9959-201ENSMUST00000068277 390 ntBASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Pcdhgc3Q91XX1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Gm45102-201ENSMUST00000207427 857 ntBASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc3Q91XX1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc3Q91XX1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc3Q91XX1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc3Q91XX1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhgc3Q91XX1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Gm9870-201ENSMUST00000063874 645 ntBASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhgc3Q91XX1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhgc3Q91XX1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms