Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Gm29257-201ENSMUST00000186115 639 ntBASIC19.41■□□□□ 0.7
Usp3Q91W36 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp3Q91W36 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp3Q91W36 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Usp3Q91W36 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp3Q91W36 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Gm6365-201ENSMUST00000054711 744 ntBASIC19.4■□□□□ 0.7
Usp3Q91W36 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp3Q91W36 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
Usp3Q91W36 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp3Q91W36 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp3Q91W36 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp3Q91W36 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Gm7290-201ENSMUST00000104990 617 ntBASIC19.39■□□□□ 0.69
Usp3Q91W36 Gm12918-201ENSMUST00000120234 636 ntBASIC19.39■□□□□ 0.69
Usp3Q91W36 Gm15710-201ENSMUST00000121821 636 ntBASIC19.39■□□□□ 0.69
Usp3Q91W36 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.39■□□□□ 0.69
Usp3Q91W36 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp3Q91W36 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Gm5075-201ENSMUST00000196916 622 ntBASIC19.39■□□□□ 0.69
Usp3Q91W36 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp3Q91W36 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.39■□□□□ 0.69
Usp3Q91W36 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.39■□□□□ 0.69
Usp3Q91W36 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Usp3Q91W36 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp3Q91W36 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Usp3Q91W36 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Usp3Q91W36 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.38■□□□□ 0.69
Usp3Q91W36 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Golph3-205ENSMUST00000228671 2842 ntBASIC19.38■□□□□ 0.69
Usp3Q91W36 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp3Q91W36 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.37■□□□□ 0.69
Usp3Q91W36 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp3Q91W36 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Gm10602-201ENSMUST00000098239 609 ntBASIC19.37■□□□□ 0.69
Usp3Q91W36 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp3Q91W36 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp3Q91W36 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.36■□□□□ 0.69
Usp3Q91W36 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp3Q91W36 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp3Q91W36 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Mir5133-201ENSMUST00000174955 77 ntBASIC19.36■□□□□ 0.69
Usp3Q91W36 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp3Q91W36 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp3Q91W36 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp3Q91W36 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp3Q91W36 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Usp3Q91W36 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp3Q91W36 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp3Q91W36 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms