Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
StrcQ8VIM6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
StrcQ8VIM6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
StrcQ8VIM6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Gm13559-201ENSMUST00000120476 863 ntBASIC22.89■■□□□ 1.25
StrcQ8VIM6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Gm21362-201ENSMUST00000194272 928 ntBASIC22.89■■□□□ 1.25
StrcQ8VIM6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC22.89■■□□□ 1.25
StrcQ8VIM6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
StrcQ8VIM6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
StrcQ8VIM6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
StrcQ8VIM6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.86■■□□□ 1.25
StrcQ8VIM6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.86■■□□□ 1.25
StrcQ8VIM6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.86■■□□□ 1.25
StrcQ8VIM6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
StrcQ8VIM6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
StrcQ8VIM6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
StrcQ8VIM6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Gm18025-201ENSMUST00000221733 862 ntBASIC22.84■■□□□ 1.25
StrcQ8VIM6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.84■■□□□ 1.25
StrcQ8VIM6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
StrcQ8VIM6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
StrcQ8VIM6 Gm27741-201ENSMUST00000185060 237 ntBASIC22.83■■□□□ 1.25
StrcQ8VIM6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
StrcQ8VIM6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
StrcQ8VIM6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
StrcQ8VIM6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
StrcQ8VIM6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
StrcQ8VIM6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.83■■□□□ 1.24
StrcQ8VIM6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Mtag2-201ENSMUST00000058665 714 ntBASIC22.82■■□□□ 1.24
StrcQ8VIM6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
StrcQ8VIM6 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.81■■□□□ 1.24
StrcQ8VIM6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
StrcQ8VIM6 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.81■■□□□ 1.24
StrcQ8VIM6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
StrcQ8VIM6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.8■■□□□ 1.24
StrcQ8VIM6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
StrcQ8VIM6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
StrcQ8VIM6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
StrcQ8VIM6 Flg-201ENSMUST00000050758 1488 ntBASIC22.79■■□□□ 1.24
StrcQ8VIM6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.79■■□□□ 1.24
StrcQ8VIM6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
StrcQ8VIM6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.79■■□□□ 1.24
StrcQ8VIM6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.78■■□□□ 1.24
StrcQ8VIM6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.78■■□□□ 1.24
StrcQ8VIM6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms