Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.75■□□□□ 0.11
H1fooQ8VIK3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H1fooQ8VIK3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H1fooQ8VIK3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Gm7860-201ENSMUST00000121190 879 ntBASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H1fooQ8VIK3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 BC021767-201ENSMUST00000126387 1716 ntBASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
H1fooQ8VIK3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms