Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cspg4Q8VHY0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cspg4Q8VHY0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cspg4Q8VHY0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cspg4Q8VHY0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cspg4Q8VHY0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cspg4Q8VHY0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Gm23634-201ENSMUST00000175071 91 ntBASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cspg4Q8VHY0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cspg4Q8VHY0 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Gm17971-201ENSMUST00000190239 806 ntBASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cspg4Q8VHY0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms