Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rab40cQ8VHQ4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rab40cQ8VHQ4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rab40cQ8VHQ4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab40cQ8VHQ4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab40cQ8VHQ4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rab40cQ8VHQ4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms