Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps4aQ8VEJ9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 AV356131-201ENSMUST00000206201 750 ntBASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4aQ8VEJ9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps4aQ8VEJ9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.14■□□□□ 0.5
Vps4aQ8VEJ9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Vps4aQ8VEJ9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps4aQ8VEJ9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps4aQ8VEJ9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps4aQ8VEJ9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms