Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.11■□□□□ 0.81
Lmcd1Q8VEE1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lmcd1Q8VEE1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lmcd1Q8VEE1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Flg-201ENSMUST00000050758 1488 ntBASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lmcd1Q8VEE1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Lmcd1Q8VEE1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Gm11539-201ENSMUST00000119837 557 ntBASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Gm13436-201ENSMUST00000120418 567 ntBASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.07■□□□□ 0.8
Lmcd1Q8VEE1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Gm11927-201ENSMUST00000118472 759 ntBASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lmcd1Q8VEE1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Gm18101-201ENSMUST00000215769 548 ntBASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Odf3b-204ENSMUST00000227834 930 ntBASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lmcd1Q8VEE1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms