Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Gm12821-201ENSMUST00000120022 600 ntBASIC18.03■□□□□ 0.48
Lsm1Q8VC85 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Gm27454-201ENSMUST00000185090 204 ntBASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm1Q8VC85 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.02■□□□□ 0.48
Lsm1Q8VC85 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm1Q8VC85 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm1Q8VC85 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm1Q8VC85 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm1Q8VC85 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.01■□□□□ 0.47
Lsm1Q8VC85 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Lsm1Q8VC85 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lsm1Q8VC85 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18■□□□□ 0.47
Lsm1Q8VC85 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18■□□□□ 0.47
Lsm1Q8VC85 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lsm1Q8VC85 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm1Q8VC85 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Lsm1Q8VC85 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Gm6139-201ENSMUST00000079261 882 ntBASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm1Q8VC85 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm1Q8VC85 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm1Q8VC85 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.97■□□□□ 0.47
Lsm1Q8VC85 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm1Q8VC85 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm1Q8VC85 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm1Q8VC85 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms