Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx2ipQ8VC66 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx2ipQ8VC66 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Gm40848-201ENSMUST00000221998 324 ntBASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.23■□□□□ 0.67
Ssx2ipQ8VC66 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx2ipQ8VC66 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx2ipQ8VC66 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Gm5874-201ENSMUST00000096101 508 ntBASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx2ipQ8VC66 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ssx2ipQ8VC66 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx2ipQ8VC66 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms