Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3kbp1Q8R550 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sh3kbp1Q8R550 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3kbp1Q8R550 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3kbp1Q8R550 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
Sh3kbp1Q8R550 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Sh3kbp1Q8R550 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3kbp1Q8R550 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3kbp1Q8R550 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Sh3kbp1Q8R550 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3kbp1Q8R550 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3kbp1Q8R550 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Mir5133-201ENSMUST00000174955 77 ntBASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3kbp1Q8R550 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3kbp1Q8R550 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sh3kbp1Q8R550 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3kbp1Q8R550 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 Gm12441-201ENSMUST00000121806 588 ntBASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3kbp1Q8R550 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3kbp1Q8R550 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms