Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpp40Q8R1F9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Gm10602-201ENSMUST00000098239 609 ntBASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.19■□□□□ 0.82
Rpp40Q8R1F9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.18■□□□□ 0.82
Rpp40Q8R1F9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Gm7290-201ENSMUST00000104990 617 ntBASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Gm12918-201ENSMUST00000120234 636 ntBASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Gm15710-201ENSMUST00000121821 636 ntBASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Gm5075-201ENSMUST00000196916 622 ntBASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpp40Q8R1F9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpp40Q8R1F9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpp40Q8R1F9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Rpp40Q8R1F9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Rpp40Q8R1F9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpp40Q8R1F9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpp40Q8R1F9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpp40Q8R1F9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rpp40Q8R1F9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rpp40Q8R1F9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rpp40Q8R1F9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rpp40Q8R1F9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms