Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sf3a1Q8K4Z5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sf3a1Q8K4Z5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Sf3a1Q8K4Z5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sf3a1Q8K4Z5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Gm7291-201ENSMUST00000199147 382 ntBASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sf3a1Q8K4Z5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sf3a1Q8K4Z5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sf3a1Q8K4Z5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sf3a1Q8K4Z5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Gm6420-201ENSMUST00000193885 723 ntBASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Sf3a1Q8K4Z5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sf3a1Q8K4Z5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms