Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Gm16042-201ENSMUST00000204813 1247 ntBASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 AC107452.1-201ENSMUST00000227963 481 ntBASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ddx54Q8K4L0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Ddx54Q8K4L0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Ddx54Q8K4L0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ddx54Q8K4L0 Flg-201ENSMUST00000050758 1488 ntBASIC24.83■■□□□ 1.56
Ddx54Q8K4L0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Gm43183-201ENSMUST00000200632 547 ntBASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Ddx54Q8K4L0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx54Q8K4L0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx54Q8K4L0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx54Q8K4L0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ddx54Q8K4L0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC24.81■■□□□ 1.56
Ddx54Q8K4L0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ddx54Q8K4L0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Gm37035-201ENSMUST00000194809 2148 ntBASIC24.79■■□□□ 1.56
Ddx54Q8K4L0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ddx54Q8K4L0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ddx54Q8K4L0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ddx54Q8K4L0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Mtag2-201ENSMUST00000058665 714 ntBASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ddx54Q8K4L0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx54Q8K4L0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx54Q8K4L0 Gm23634-201ENSMUST00000175071 91 ntBASIC24.74■■□□□ 1.55
Ddx54Q8K4L0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC24.74■■□□□ 1.55
Ddx54Q8K4L0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ddx54Q8K4L0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms