Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8bQ8K440 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Abca8bQ8K440 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Abca8bQ8K440 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC28.25■■■□□ 2.11
Abca8bQ8K440 Gm11539-201ENSMUST00000119837 557 ntBASIC28.25■■■□□ 2.11
Abca8bQ8K440 Gm13436-201ENSMUST00000120418 567 ntBASIC28.25■■■□□ 2.11
Abca8bQ8K440 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8bQ8K440 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8bQ8K440 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8bQ8K440 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Abca8bQ8K440 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Gm6659-201ENSMUST00000174752 547 ntBASIC28.23■■■□□ 2.11
Abca8bQ8K440 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca8bQ8K440 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC28.22■■■□□ 2.11
Abca8bQ8K440 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca8bQ8K440 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC28.22■■■□□ 2.11
Abca8bQ8K440 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca8bQ8K440 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca8bQ8K440 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca8bQ8K440 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Abca8bQ8K440 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
Abca8bQ8K440 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Abca8bQ8K440 Gm21362-201ENSMUST00000194272 928 ntBASIC28.2■■■□□ 2.1
Abca8bQ8K440 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC28.2■■■□□ 2.1
Abca8bQ8K440 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Abca8bQ8K440 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8bQ8K440 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Odf3b-204ENSMUST00000227834 930 ntBASIC28.19■■■□□ 2.1
Abca8bQ8K440 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Abca8bQ8K440 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Gm18025-201ENSMUST00000221733 862 ntBASIC28.18■■■□□ 2.1
Abca8bQ8K440 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca8bQ8K440 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
Abca8bQ8K440 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca8bQ8K440 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca8bQ8K440 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
Abca8bQ8K440 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca8bQ8K440 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8bQ8K440 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca8bQ8K440 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Abca8bQ8K440 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Zfp783-201ENSMUST00000095946 670 ntBASIC28.14■■■□□ 2.1
Abca8bQ8K440 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca8bQ8K440 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Abca8bQ8K440 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC28.14■■■□□ 2.09
Abca8bQ8K440 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.09
Abca8bQ8K440 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
Abca8bQ8K440 Gm43183-201ENSMUST00000200632 547 ntBASIC28.14■■■□□ 2.09
Abca8bQ8K440 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC28.13■■■□□ 2.09
Abca8bQ8K440 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
Abca8bQ8K440 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8bQ8K440 Dmtn-209ENSMUST00000228295 2572 ntBASIC28.13■■■□□ 2.09
Abca8bQ8K440 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8bQ8K440 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Abca8bQ8K440 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8bQ8K440 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Abca8bQ8K440 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms