Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim68Q8K243 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim68Q8K243 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim68Q8K243 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim68Q8K243 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim68Q8K243 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.33■□□□□ 0.85
Trim68Q8K243 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim68Q8K243 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.33■□□□□ 0.85
Trim68Q8K243 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim68Q8K243 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim68Q8K243 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.33■□□□□ 0.85
Trim68Q8K243 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim68Q8K243 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim68Q8K243 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim68Q8K243 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim68Q8K243 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim68Q8K243 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim68Q8K243 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.32■□□□□ 0.84
Trim68Q8K243 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim68Q8K243 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim68Q8K243 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim68Q8K243 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trim68Q8K243 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim68Q8K243 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trim68Q8K243 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Trim68Q8K243 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim68Q8K243 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim68Q8K243 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim68Q8K243 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim68Q8K243 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.31■□□□□ 0.84
Trim68Q8K243 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.31■□□□□ 0.84
Trim68Q8K243 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trim68Q8K243 Gm13534-201ENSMUST00000121169 513 ntBASIC20.3■□□□□ 0.84
Trim68Q8K243 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trim68Q8K243 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim68Q8K243 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim68Q8K243 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim68Q8K243 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim68Q8K243 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim68Q8K243 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim68Q8K243 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim68Q8K243 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim68Q8K243 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim68Q8K243 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim68Q8K243 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim68Q8K243 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.28■□□□□ 0.84
Trim68Q8K243 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim68Q8K243 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim68Q8K243 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim68Q8K243 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim68Q8K243 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim68Q8K243 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim68Q8K243 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim68Q8K243 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim68Q8K243 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim68Q8K243 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim68Q8K243 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim68Q8K243 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim68Q8K243 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim68Q8K243 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim68Q8K243 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Trim68Q8K243 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms