Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1aQ8CIG0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Depdc1aQ8CIG0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.33■■□□□ 1.01
Depdc1aQ8CIG0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1aQ8CIG0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Depdc1aQ8CIG0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
Depdc1aQ8CIG0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Depdc1aQ8CIG0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.33■■□□□ 1
Depdc1aQ8CIG0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Depdc1aQ8CIG0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Depdc1aQ8CIG0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Gm20049-201ENSMUST00000219950 730 ntBASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.3■■□□□ 1
Depdc1aQ8CIG0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1aQ8CIG0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1aQ8CIG0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Depdc1aQ8CIG0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.27■■□□□ 1
Depdc1aQ8CIG0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Depdc1aQ8CIG0 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.27■■□□□ 1
Depdc1aQ8CIG0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Depdc1aQ8CIG0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.27■■□□□ 1
Depdc1aQ8CIG0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.27■■□□□ 1
Depdc1aQ8CIG0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Depdc1aQ8CIG0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1aQ8CIG0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1aQ8CIG0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms