Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Gm7889-201ENSMUST00000185591 958 ntBASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Gm6659-201ENSMUST00000174752 547 ntBASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1l1Q8CGM2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Gm7367-201ENSMUST00000057611 492 ntBASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1l1Q8CGM2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rp1l1Q8CGM2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rp1l1Q8CGM2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1l1Q8CGM2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.83■□□□□ 0.76
Rp1l1Q8CGM2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rp1l1Q8CGM2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1l1Q8CGM2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Gm3375-201ENSMUST00000203929 796 ntBASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1l1Q8CGM2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Gm11539-201ENSMUST00000119837 557 ntBASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Gm13436-201ENSMUST00000120418 567 ntBASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Gm21362-201ENSMUST00000194272 928 ntBASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1l1Q8CGM2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rp1l1Q8CGM2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Gm13559-201ENSMUST00000120476 863 ntBASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Gm30025-201ENSMUST00000218555 728 ntBASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rp1l1Q8CGM2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms