Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc28bQ8CEG5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc28bQ8CEG5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc28bQ8CEG5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.57■□□□□ 0.56
Ccdc28bQ8CEG5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc28bQ8CEG5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc28bQ8CEG5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc28bQ8CEG5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc28bQ8CEG5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc28bQ8CEG5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc28bQ8CEG5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccdc28bQ8CEG5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Serp2-204ENSMUST00000228055 705 ntBASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc28bQ8CEG5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc28bQ8CEG5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc28bQ8CEG5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc28bQ8CEG5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc28bQ8CEG5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms