Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC20.89■□□□□ 0.94
Ccdc38Q8CDN8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc38Q8CDN8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc38Q8CDN8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc38Q8CDN8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc38Q8CDN8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc38Q8CDN8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.88■□□□□ 0.93
Ccdc38Q8CDN8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc38Q8CDN8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.86■□□□□ 0.93
Ccdc38Q8CDN8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc38Q8CDN8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc38Q8CDN8 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc38Q8CDN8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc38Q8CDN8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc38Q8CDN8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc38Q8CDN8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc38Q8CDN8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc38Q8CDN8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms