Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.04■■□□□ 1.12
Shisa4Q8CA71 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Shisa4Q8CA71 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Gm13148-201ENSMUST00000118892 745 ntBASIC22.03■■□□□ 1.12
Shisa4Q8CA71 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.03■■□□□ 1.12
Shisa4Q8CA71 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Gm12933-201ENSMUST00000120203 872 ntBASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Shisa4Q8CA71 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
Shisa4Q8CA71 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Shisa4Q8CA71 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Shisa4Q8CA71 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Shisa4Q8CA71 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22■■□□□ 1.11
Shisa4Q8CA71 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Shisa4Q8CA71 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Shisa4Q8CA71 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Shisa4Q8CA71 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Shisa4Q8CA71 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms