Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.67■□□□□ 0.58
Aph1bQ8C7N7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Aph1bQ8C7N7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Aph1bQ8C7N7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Aph1bQ8C7N7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Aph1bQ8C7N7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Aph1bQ8C7N7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
Aph1bQ8C7N7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.64■□□□□ 0.58
Aph1bQ8C7N7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Aph1bQ8C7N7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Aph1bQ8C7N7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Gm6139-201ENSMUST00000079261 882 ntBASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Aph1bQ8C7N7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Aph1bQ8C7N7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Aph1bQ8C7N7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Aph1bQ8C7N7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms