Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Fam78aQ8C552 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78aQ8C552 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.04■□□□□ 0.8
Fam78aQ8C552 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.04■□□□□ 0.8
Fam78aQ8C552 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Fam78aQ8C552 Gm11249-201ENSMUST00000117071 859 ntBASIC20.03■□□□□ 0.8
Fam78aQ8C552 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.03■□□□□ 0.8
Fam78aQ8C552 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.03■□□□□ 0.8
Fam78aQ8C552 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam78aQ8C552 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Fam78aQ8C552 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Fam78aQ8C552 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Fam78aQ8C552 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Mir6982-201ENSMUST00000184354 68 ntBASIC20.02■□□□□ 0.8
Fam78aQ8C552 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Fam78aQ8C552 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Fam78aQ8C552 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Fam78aQ8C552 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.02■□□□□ 0.79
Fam78aQ8C552 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Fam78aQ8C552 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Fam78aQ8C552 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Fam78aQ8C552 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam78aQ8C552 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Fam78aQ8C552 Mir7071-201ENSMUST00000184847 69 ntBASIC20.01■□□□□ 0.79
Fam78aQ8C552 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam78aQ8C552 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam78aQ8C552 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fam78aQ8C552 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Fam78aQ8C552 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Fam78aQ8C552 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20■□□□□ 0.79
Fam78aQ8C552 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Fam78aQ8C552 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Fam78aQ8C552 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Gm2399-201ENSMUST00000104944 225 ntBASIC19.99■□□□□ 0.79
Fam78aQ8C552 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam78aQ8C552 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam78aQ8C552 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Fam78aQ8C552 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam78aQ8C552 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam78aQ8C552 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam78aQ8C552 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Fam78aQ8C552 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms