Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Gm15565-201ENSMUST00000118890 427 ntBASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ptcd1Q8C2E4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ptcd1Q8C2E4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ptcd1Q8C2E4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ptcd1Q8C2E4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd1Q8C2E4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd1Q8C2E4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd1Q8C2E4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd1Q8C2E4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.19■■□□□ 1.3
Ptcd1Q8C2E4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ptcd1Q8C2E4 Dio3-201ENSMUST00000097228 1449 ntBASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ptcd1Q8C2E4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ptcd1Q8C2E4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ptcd1Q8C2E4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptcd1Q8C2E4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.16■■□□□ 1.3
Ptcd1Q8C2E4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptcd1Q8C2E4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptcd1Q8C2E4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ptcd1Q8C2E4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ptcd1Q8C2E4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptcd1Q8C2E4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ptcd1Q8C2E4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms