Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf3Q8C120 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.58■□□□□ 0.73
Sh3rf3Q8C120 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sh3rf3Q8C120 Rarb-207ENSMUST00000225921 2756 ntBASIC19.58■□□□□ 0.73
Sh3rf3Q8C120 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf3Q8C120 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf3Q8C120 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sh3rf3Q8C120 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf3Q8C120 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 BC021767-201ENSMUST00000126387 1716 ntBASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf3Q8C120 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf3Q8C120 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf3Q8C120 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms